Scientific Employee in Biomedical Informatics

The Department for IT and Applied Medical Informatics is an institution of the Medical Faculty and the University Hospital that bundles research and services in digital medicine. Within the department, the Institute for Translational Bioinformatics develops an IT platform that enables data exchange for care and research. This nationwide infrastructure is used within the framework of the Genome Sequencing Model Project (GenomDE) to establish genome sequencing in the fields of oncology and rare diseases in routine medical care.

• Supervision of software systems developed at TBI or in cooperation with partners
• Ensuring smooth operation, troubleshooting, error analysis, maintenance and updates of software systems
• Planning, development and implementation of ETL pipelines for data extraction and provision, as well as tests and technical documentation
• Participation and implementation of (FHIR) mappings for data harmonization
• Implementation of technical requirements from project partners, e.g. provision of queries and reports
• User administration
• Implementation of security measures to ensure integrity and confidentiality of processed data

• Bachelor's degree in Computer Science or comparable field, Master's preferred
• Very good German and English skills (negotiation level / C1)
• Experience with object-oriented programming required, ideally with Scala, Java, Python, SQL
• JSON data processing, REST APIs, databases and Docker desirable
• FHIR an advantage